CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing
Top Cited Papers
Open Access
- 30 August 2011
- journal article
- research article
- Published by Springer Nature in BMC Bioinformatics
- Vol. 12 (1), 356
- https://doi.org/10.1186/1471-2105-12-356
Abstract
Next-generation sequencing technologies have decentralized sequence acquisition, increasing the demand for new bioinformatics tools that are easy to use, portable across multiple platforms, and scalable for high-throughput applications. Cloud computing platforms provide on-demand access to computing infrastructure over the Internet and can be used in combination with custom built virtual machines to distribute pre-packaged with pre-configured software.Keywords
This publication has 49 references indexed in Scilit:
- Computational solutions to large-scale data management and analysisNature Reviews Genetics, 2010
- Cloud computing and the DNA data raceNature Biotechnology, 2010
- Ergatis: a web interface and scalable software system for bioinformatics workflowsBioinformatics, 2010
- QIIME allows analysis of high-throughput community sequencing dataNature Methods, 2010
- An Ergatis-based prokaryotic genome annotation web serverBioinformatics, 2010
- Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic AnnotationOMICS: A Journal of Integrative Biology, 2008
- UniRef: comprehensive and non-redundant UniProt reference clustersBioinformatics, 2007
- Identifying bacterial genes and endosymbiont DNA with GlimmerBioinformatics, 2007
- Open software for biologists: from famine to feastNature Biotechnology, 2006
- GenePattern 2.0Nature Genetics, 2006