Milestones in electron crystallography
- 1 August 2006
- journal article
- review article
- Published by Springer Nature in Journal of Computer-Aided Molecular Design
- Vol. 20 (7-8), 519-527
- https://doi.org/10.1007/s10822-006-9075-x
Abstract
Electron crystallography determines the structure of membrane embedded proteins in the two-dimensionally crystallized state by cryo-transmission electron microscopy imaging and computer structure reconstruction. Milestones on the path to the structure are high-level expression, purification of functional protein, reconstitution into two-dimensional lipid membrane crystals, high-resolution imaging, and structure determination by computer image processing. Here we review the current state of these methods. We also created an Internet information exchange platform for electron crystallography, where guidelines for imaging and data processing method are maintained. The server (http://2dx.org) provides the electron crystallography community with a central information exchange platform, which is structured in blog and Wiki form, allowing visitors to add comments or discussions. It currently offers a detailed step-by-step introduction to image processing with the MRC software program. The server is also a repository for the 2dx software package, a user-friendly image processing system for 2D membrane protein crystals.Keywords
This publication has 70 references indexed in Scilit:
- Crystal Structure of a Mammalian Voltage-Dependent Shaker Family K + ChannelScience, 2005
- The channel architecture of aquaporin 0 at a 2.2-Å resolutionProceedings of the National Academy of Sciences, 2004
- Mechanism of Ammonia Transport by Amt/MEP/Rh: Structure of AmtB at 1.35 ÅScience, 2004
- Structure and Mechanism of the Lactose Permease of Escherichia coliScience, 2003
- Three-dimensional structure of a bacterial oxalate transporterNature Structural & Molecular Biology, 2002
- Three-dimensional fold of the human AQP1 water channel determined at 4 Å resolution by electron crystallography of two-dimensional crystals embedded in ice 1 1Edited by W. BaumeisterJournal of Molecular Biology, 2000
- The Protein Data BankNucleic Acids Research, 2000
- SPIDER and WEB: Processing and Visualization of Images in 3D Electron Microscopy and Related FieldsJournal of Structural Biology, 1996
- The CCP4 suite: programs for protein crystallographyActa Crystallographica Section D-Biological Crystallography, 1994
- Image contrast in high-resolution electron microscopy of biological macromolecules: TMV in iceUltramicroscopy, 1992