Creation and Reduction of a Morphologically Detailed Model of a Leech Heart Interneuron
- 1 October 2006
- journal article
- research article
- Published by American Physiological Society in Journal of Neurophysiology
- Vol. 96 (4), 2107-2120
- https://doi.org/10.1152/jn.00026.2006
Abstract
Conductance-based neuron models aid in understanding the role intrinsic and synaptic currents play in producing neuronal activity. Incorporating morphological detail into a model allows for additional analysis of nonhomogeneous distributions of active and synaptic conductances, as well as spatial segregation of electrical events. We developed a morphologically detailed “Full Model” of a leech heart interneuron that replicates reasonably well intracellular recordings from these interneurons. However, it constitutes hundreds of compartments, each increasing parameter space and simulation time. To reduce the number of compartments of the Full Model, while preserving conductance densities and distributions, its compartments were grouped into functional groups that each share identical conductance densities. Each functional group was sequentially reduced to one or two compartments, preserving surface area, conductance densities, and its contribution to input resistance. As a result, the input resistance and membrane time constant were preserved. The axial resistances of several compartments were rescaled to match the amplitude of synaptic currents and low-threshold calcium currents and the shape of action potentials to those in the Full Model. This reduced model, with intrinsic conductances, matched the activity of the Full Model for a variety of simulated current-clamp and voltage-clamp data. Because surface area and conductance distribution of the functional groups of the Full Model were maintained, parameter changes introduced into the reduced model can be directly translated to the Full Model. Thus our computationally efficient reduced morphology model can be used as a tool for exploring the parameter space of the Full Model and in network simulations.Keywords
This publication has 49 references indexed in Scilit:
- Unique features of action potential initiation in cortical neuronsNature, 2006
- Myomodulin IncreasesIhand Inhibits the Na/K Pump to Modulate Bursting in Leech Heart InterneuronsJournal of Neurophysiology, 2005
- Constraining Compartmental Models Using Multiple Voltage Recordings and Genetic AlgorithmsJournal of Neurophysiology, 2005
- Robustness of Burst Firing in Dissociated Purkinje Neurons with Acute or Long-Term Reductions in Sodium ConductanceJournal of Neuroscience, 2005
- Single-Column Thalamocortical Network Model Exhibiting Gamma Oscillations, Sleep Spindles, and Epileptogenic BurstsJournal of Neurophysiology, 2005
- Detailed Model of Intersegmental Coordination in the Timing Network of the Leech Heartbeat Central Pattern GeneratorJournal of Neurophysiology, 2004
- Simplified models of neocortical pyramidal cells preserving somatodendritic voltage attenuationNeurocomputing, 2001
- Voltage‐gated K+ channels in layer 5 neocortical pyramidal neurones from young rats: subtypes and gradientsThe Journal of Physiology, 2000
- Distribution and developmental expression of octopamine‐immunoreactive neurons in the central nervous system of the leechJournal of Comparative Neurology, 1995
- Initiation and spread of sodium action potentials in cerebellar purkinje cellsNeuron, 1994