Molecular Structure of Peptaibol Antibiotics: Solution Conformation and Crystal Structure of the Octapeptide Corresponding to the 2–9 Sequence of Emerimicins III and IV

Abstract

The infrared absorption and ¹H nuclear magnetic resonance analyses of chloroform solutions of the terminally-blocked segment corresponding to the 2–9 sequence of emerimicins III and IV, -(Aib)₃-L-Val-Gly-L-Leu-(Aib)_2-, are consistent with the presence of a 3₁₀-helical structure of high thermal stability. The crystal structure of the octapeptide, obtained by X-ray diffraction indicates the formation of a right-handed 3₁₀-helix, stabilized by six consecutive intramolecular N-H OC H-bonds, slightly distorted at the level of the L-Leu residue.