Ultrabithorax regulates genes at several levels of the wing-patterning hierarchy to shape the development of theDrosophila haltere

Abstract
Arthropods and vertebrates are constructed of many serially homologous structures whose individual patterns are regulated byHox genes. The Hox-regulated target genes and developmental pathways that determine the morphological differences between any homologous structures are not known. The differentiation of theDrosophila haltere from the wing through the action of theUltrabithorax (Ubx) gene is a classic example ofHox regulation of serial homology, although no Ubx-regulated genes in the haltere have been identified previously. Here, we show that Ubx represses the expression of the Wingless (Wg) signaling protein and a subset of Wg- and Decapentaplegic-activated genes such asspalt-related, vestigial, Serum Response Factor, andachaete-scute, whose products regulate morphological features that differ between the wing and haltere. In addition, we found that some genes in the same developmental pathway are independently regulated by Ubx. Our results suggest that Ubx, and Hox genes in general, independently and selectively regulate genes that act at many levels of regulatory hierarchies to shape the differential development of serially homologous structures.