NAMD2: Greater Scalability for Parallel Molecular Dynamics
- 1 May 1999
- journal article
- Published by Elsevier in Journal of Computational Physics
- Vol. 151 (1), 283-312
- https://doi.org/10.1006/jcph.1999.6201
Abstract
No abstract availableThis publication has 43 references indexed in Scilit:
- A domain decomposition parallel processing algorithm for molecular dynamics simulations of systems of arbitrary connectivityComputer Physics Communications, 1997
- NAMD: a Parallel, Object-Oriented Molecular Dynamics ProgramThe International Journal of Supercomputer Applications and High Performance Computing, 1996
- Comments on P3M, FMM, and the Ewald method for large periodic Coulombic systemsComputer Physics Communications, 1996
- VMD: Visual molecular dynamicsJournal of Molecular Graphics, 1996
- Crystal structure of the RAR-γ ligand-binding domain bound to all-trans retinoic acidNature, 1995
- MDScope — a visual computing environment for structural biologyComputer Physics Communications, 1995
- A domain decomposition parallel processing algorithm for molecular dynamics simulations of polymersComputer Physics Communications, 1994
- Reversible multiple time scale molecular dynamicsThe Journal of Chemical Physics, 1992
- Large Scale Molecular Dynamics on Parallel Computers using the Link-cell AlgorithmMolecular Simulation, 1991
- PVM: A framework for parallel distributed computingConcurrency: Practice and Experience, 1990