We consider a large condensate in a rotating anisotropic harmonic trap. Using the method of matched asymptotic expansions, we derive the velocity of an element of vortex line as a function of the local gradient of the trap potential, the line curvature and the angular velocity of the trap rotation. This velocity yields small-amplitude normal modes of the vortex for 2D and 3D condensates. For an axisymmetric trap, the motion of the vortex line is a superposition of plane-polarized standing-wave modes. In a 2D condensate, the planar normal modes are degenerate, and their superposition can result in helical traveling waves, which differs from a 3D condensate. Including the effects of trap rotation allows us to find the angular velocity that makes the vortex locally stable. For a cigar-shape condensate, the vortex curvature makes a significant contribution to the frequency of the lowest unstable normal mode; furthermore, additional modes with negative frequencies appear. As a result, it is considerably more difficult to stabilize a central vortex in a cigar-shape condensate than in a disc-shape one. Normal modes with imaginary frequencies can occur for a nonaxisymmetric condensate (in both 2D and 3D). In connection with recent JILA experiments, we consider the motion of a straight vortex line in a slightly nonspherical condensate. The vortex line changes its orientation in space at the rate proportional to the degree of trap anisotropy and can exhibit periodic recurrences.