Activation segment dimerization: a mechanism for kinase autophosphorylation of non-consensus sites
Open Access
- 31 January 2008
- journal article
- research article
- Published by Springer Nature in The EMBO Journal
- Vol. 27 (4), 704-714
- https://doi.org/10.1038/emboj.2008.8
Abstract
Protein kinase autophosphorylation of activation segment residues is a common regulatory mechanism in phosphorylation‐dependent signalling cascades. However, the molecular mechanisms that guarantee specific and efficient phosphorylation of these sites have not been elucidated. Here, we report on three novel and diverse protein kinase structures that reveal an exchanged activation segment conformation. This dimeric arrangement results in an active kinase conformation in trans , with activation segment phosphorylation sites in close proximity to the active site of the interacting protomer. Analytical ultracentrifugation and chemical cross‐linking confirmed the presence of dimers in solution. Consensus substrate sequences for each kinase showed that the identified activation segment autophosphorylation sites are non‐consensus substrate sites. Based on the presented structural and functional data, a model for specific activation segment phosphorylation at non‐consensus substrate sites is proposed that is likely to be common to other kinases from diverse subfamilies.Keywords
This publication has 47 references indexed in Scilit:
- MolProbity: all-atom contacts and structure validation for proteins and nucleic acidsNucleic Acids Research, 2007
- Crystal Structures of the p21-Activated Kinases PAK4, PAK5, and PAK6 Reveal Catalytic Domain Plasticity of Active Group II PAKsStructure, 2007
- Chemical screening methods to identify ligands that promote protein stability, protein crystallization, and structure determinationProceedings of the National Academy of Sciences, 2006
- Trans-activation of the DNA-damage signalling protein kinase Chk2 by T-loop exchangeThe EMBO Journal, 2006
- THESEUS: maximum likelihood superpositioning and analysis of macromolecular structuresBioinformatics, 2006
- Two-stage mechanism for activation of the DNA replication checkpoint kinase Cds1 in fission yeastGenes & Development, 2006
- Coot: model-building tools for molecular graphicsActa Crystallographica Section D-Biological Crystallography, 2004
- Structures of human MAP kinase kinase 1 (MEK1) and MEK2 describe novel noncompetitive kinase inhibitionNature Structural & Molecular Biology, 2004
- ARP⧸wARP and Automatic Interpretation of Protein Electron Density MapsPublished by Elsevier ,2003
- Crystal structure of the Src family tyrosine kinase HckNature, 1997