Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure
Open Access
- 1 January 1999
- journal article
- research article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 27 (1), 74-78
- https://doi.org/10.1093/nar/27.1.74
Abstract
The Saccharomyces Genome Database (SGD) collects and organizes information about the molecular biology and genetics of the yeast Saccharomyces cerevisiae. The latest protein structure and comparison tools available at SGD are presented here. With the completion of the yeast sequence and the Caenorhabditis elegans sequence soon to follow, comparison of proteins from complete eukaryotic proteomes will be an extremely powerful way to learn more about a particular protein's structure, its function, and its relationships with other proteins. SGD can be accessed through the World Wide Web at http://genome-www.stanford.edu/Saccharomyces/Keywords
This publication has 17 references indexed in Scilit:
- SGD: Saccharomyces Genome DatabaseNucleic Acids Research, 1998
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997
- Cn3D: a new generation of three-dimensional molecular structure viewerTrends in Biochemical Sciences, 1997
- WebMol—a Java-based PDB viewerTrends in Biochemical Sciences, 1997
- [29] Protein data bank archives of three-dimensional macromolecular structuresMethods in Enzymology, 1997
- [27] Local alignment statisticsMethods in Enzymology, 1996
- SCOP: a structural classification of proteins database for the investigation of sequences and structures.Journal of Molecular Biology, 1995
- Basic Local Alignment Search ToolJournal of Molecular Biology, 1990
- Identification of common molecular subsequencesJournal of Molecular Biology, 1981
- The protein data bank: A computer-based archival file for macromolecular structuresJournal of Molecular Biology, 1977