HCPM--program for hierarchical clustering of protein models
Open Access
- 19 April 2005
- journal article
- research article
- Published by Oxford University Press (OUP) in Bioinformatics
- Vol. 21 (14), 3179-3180
- https://doi.org/10.1093/bioinformatics/bti450
Abstract
Summary: HCPM is a tool for clustering protein structures from comparative modeling, ab initio structure prediction, etc. A hierarchical clustering algorithm is designed and tested, and a heuristic is provided for an optimal cluster selection. The method has been successfully tested during the CASP6 experiment. Availability: HCPM program can be downloaded from http://www.biocomp.chem.uw.edu.pl/HCPM/ Contact:dgront@chem.uw.edu.plKeywords
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