The role of segment interactions in pattern recognition between random heteropolymers and disordered surfaces
- 1 June 2000
- journal article
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 112 (21), 9655-9660
- https://doi.org/10.1063/1.481582
Abstract
Recent studies have shown that preferential adsorption of random heteropolymers on disordered multifunctional surfaces occurs when the statistics describing the monomer sequence and the statistics describing the distribution of sites on the surface are matched in a certain way. The polymers undergo a sharp transition from weak to strong adsorption, indicative of pattern recognition. In this work, we continue to study the behavior of random heteropolymers as they adsorb on disordered surfaces using a nonreplica mean-field model that accounts for distinct and competitive interactions both among the polymer segments as well as between the polymer segments and sites on the surface. We find that strong interactions between polymer segments and between segments and sites on the surface are dominated by energetically favorable contacts among the segments and between segments and surface sites, respectively. Our results indicate that the polymers strongly adsorb in conformations that allow for a very small number of contacts between the segments, implying that the polymers strongly adsorb in relatively flat and stretched conformations.Keywords
This publication has 20 references indexed in Scilit:
- Pattern recognition in self-assemblyCurrent Opinion in Colloid & Interface Science, 1998
- Adsorption of random copolymers on disordered surfacesComputational and Theoretical Polymer Science, 1998
- Recognition between random heteropolymers and multifunctional disordered surfacesChemical Physics Letters, 1997
- Adsorption-Freezing Transition for Random Heteropolymers near Disordered 2D Manifolds due to “Pattern Matching”Physical Review Letters, 1996
- Evidence for nonrandom hydrophobicity structures in protein chains.Proceedings of the National Academy of Sciences, 1996
- Surface Site Heterogeneity and Lateral Interactions in Multipoint Protein AdsorptionThe Journal of Physical Chemistry, 1996
- Effective Inhibitors of Hemagglutination by Influenza Virus Synthesized from Polymers Having Active Ester Groups. Insight into Mechanism of InhibitionJournal of Medicinal Chemistry, 1995
- Nonrandomness in protein sequences: evidence for a physically driven stage of evolution?Proceedings of the National Academy of Sciences, 1994
- Multiple-site binding interactions in metal-affinity chromatography: I. Equilibrium binding of engineered histidine-containing cytochromes cJournal of Chromatography A, 1994
- Polyacrylamides bearing pendant .alpha.-sialoside groups strongly inhibit agglutination of erythrocytes by influenza virusJournal of the American Chemical Society, 1991