Estimating disease prevalence in the absence of a gold standard
- 12 July 2002
- journal article
- research article
- Published by Wiley in Statistics in Medicine
- Vol. 21 (18), 2653-2669
- https://doi.org/10.1002/sim.1178
Abstract
When estimating disease prevalence, it is not uncommon to have data from conditionally dependent diagnostic tests. In such a situation, the estimation of prevalence is difficult if none of the tests is considered to be a gold standard. In this paper we develop a Bayesian approach to estimating disease prevalence based on the results of two diagnostic tests, allowing for the possibility that the tests are conditionally dependent, but not conditioning on any particular dependence structure. This involves the construction of four models with various forms of conditional dependence and uses Bayesian model averaging, enabled by reversible jump MCMC, to obtain an overall estimate of the prevalence. This methodology is demonstrated using a study on the prevalence of Strongyloides infection. Copyright © 2002 John Wiley & Sons, Ltd.Keywords
This publication has 22 references indexed in Scilit:
- Bayesian Approaches to Modeling the Conditional Dependence Between Multiple Diagnostic TestsBiometrics, 2001
- Log-linear and logistic modeling of dependence among diagnostic testsPreventive Veterinary Medicine, 2000
- Bayesian model averaging: a tutorial (with comments by M. Clyde, David Draper and E. I. George, and a rejoinder by the authorsStatistical Science, 1999
- A Biomedical Application of Latent Class Models with Random EffectsJournal of the Royal Statistical Society Series C: Applied Statistics, 1998
- Estimating the Prevalence of Drug Use from Self-Reports in a Cohort for which Biologic Data are Available for a SubsampleAmerican Journal of Epidemiology, 1996
- Reversible jump Markov chain Monte Carlo computation and Bayesian model determinationBiometrika, 1995
- Bayesian Computation and Stochastic SystemsStatistical Science, 1995
- Sampling-Based Approaches to Calculating Marginal DensitiesJournal of the American Statistical Association, 1990
- Simulation Run Length Control in the Presence of an Initial TransientOperations Research, 1983
- A Coefficient of Agreement for Nominal ScalesEducational and Psychological Measurement, 1960