Biochemistry of terminal deoxynucleotidyltransferase: mechanism of inhibition by adenosine 5'-triphosphate

Abstract

The polymerization of deoxyribonucleoside triphosphate catalyzed by terminal deoxyribonucleotidyltransferase calf thymus (TdT, EC 2.7.7.31) is severely inhibited by the addition of ribonucleoside triphosphates, ATP being the most potent inhibitor. Examination of the inhibitory effect of ATP using oligo(dA)12-18 as well as activated DNA as primers revealed that ATP inhibition is not due to its addition onto a 3''-OH primer terminus as judged by the lack of incorporation of labeled ATP, although under similar conditions incorporation of GTP can be demonstrated, a consistent degree of inhibition was noted independent of primer or enzyme concentration; addition of ATP to an ongoing reaction promptly reduces the rate of polymerization; kinetic studies indicate a competitive (with respect to substrate deoxy triphosphate) pattern of inhibition; addition of excess deoxyribotriphosphate promptly relieves the inhibition. Unlike ATP, other ribotriphosphates yield a mixed pattern of inhibition partly mediated by competitive mechanisms. GTP and CTP and to a minor extent UTP are incorporated into DNA in the presence or absence of deoxy triphosphate. Addition of ATP also inhibits incorporation of GTP and CTP.