Subdiffraction Imaging through the Selective Donut-Mode Depletion of Thermally Stable Photoswitchable Fluorophores: Numerical Analysis and Application to the Fluorescent Protein Dronpa
- 30 November 2007
- journal article
- research article
- Published by American Chemical Society (ACS) in Journal of the American Chemical Society
- Vol. 129 (51), 16132-16141
- https://doi.org/10.1021/ja076128z
Abstract
The fast and reversible on/off switching of the fluorescence emission of the GFP-like fluorescent protein Dronpa has attracted considerable interest for applications in subdiffraction imaging. In this paper we study the use of a donut-mode beam in combination with two more overlapping laser beams to increase the imaging resolution through selective switching to the nonfluorescent photoswitched state. We devise and run a series of numerical simulations to determine suitable photophysical parameters of prospective, thermally stable photoswitchable molecules, in terms of photoswitching quantum yields, fatigue resistance, and possible presence of transient nonfluorescent states. Many of our findings are applicable to other measurements that make use of donut beams, and these guidelines can be used in the synthesis and screening of novel photoswitchable compounds. We experimentally demonstrate the possibility of obtaining increased resolution by making use of the efficient and thermally stable Dronpa photoswitching, using equipment that is commonly available.Keywords
This publication has 26 references indexed in Scilit:
- Fluorescent Proteins and Their Use in Marine Biosciences, Biotechnology, and ProteomicsMarine Biotechnology, 2007
- Reversible Red Fluorescent Molecular SwitchesAngewandte Chemie International Edition, 2006
- Fluorescent proteins: maturation, photochemistry and photophysicsCurrent Opinion in Structural Biology, 2006
- Photo-induced protonation/deprotonation in the GFP-like fluorescent protein Dronpa: mechanism responsible for the reversible photoswitchingPhotochemical & Photobiological Sciences, 2006
- A guide to choosing fluorescent proteinsNature Methods, 2005
- Photoactivatable fluorescent proteinsNature Reviews Molecular Cell Biology, 2005
- Reversible single-molecule photoswitching in the GFP-like fluorescent protein DronpaProceedings of the National Academy of Sciences, 2005
- Carbocyanine Dyes as Efficient Reversible Single-Molecule Optical SwitchJournal of the American Chemical Society, 2005
- Regulated Fast Nucleocytoplasmic Shuttling Observed by Reversible Protein HighlightingScience, 2004
- Digital Photoswitching of Fluorescence Based on the Photochromism of Diarylethene Derivatives at a Single-Molecule LevelJournal of the American Chemical Society, 2004