An exactly solvable Ogston model of gel electrophoresis: I. The role of the symmetry and randomness of the gel structure
- 1 January 1996
- journal article
- gel electrophoresis
- Published by Wiley in Electrophoresis
- Vol. 17 (6), 977-988
- https://doi.org/10.1002/elps.1150170604
Abstract
The Ogston‐Morris‐Rodbard‐Chrambach model (OMRCM) of gel electrophoresis assumes that the mobility (μ) of charged particles is directly proportional to the fractional volume (f) of the gel that is available to them. Many authors have studied the fractional volume f in detail for various particle shapes, but the original assumption, that μsf, has not been scrutinized seriously. In fact, this geometrical model of electrophoresis does not take into account the connectivity of the gel pores or the precise gel architecture. Recently (G. W. Slater and H. L. Guo, Electrophoresis 1995, 16, 11–15) we developed a Monte Carlo computer simulation algorithm to study the electrophoretic motion of simple particles in gels in the presence of fields of arbitrary strength. Our preliminary results indicated that the mobility and the fractional volume were not generally proportional to one another. In this article, we show how to calculate, in the limit where the field intensity is vanishingly small, the exact electrophoretic mobility of particles in any type of gel in two or more dimensions. Our results, presented here for some simple two‐dimensional systems, indicate that a particle can have different electrophoretic mobilities in gels in which it has access to the same fractional available volume f. The curvature of the Ferguson plot is shown to be related to the symmetry and the degree of randomness that characterize the gel. We also demonstrate that the OMRCM is, in fact, a mean field approximation that corresponds to a uniform, annealed gel. We thus conclude that the relation between the electrophoretic mobility and the gel concentration (C) is a delicate function of the gel architecture, and that one needs more than the fractional volume f to fully characterize the transport properties of migrating particles in separation media. Exact relationships between the mobility μ and the gel concentration C are given for our model gels.This publication has 22 references indexed in Scilit:
- Ogston gel electrophoretic sieving: How is the fractional volume available to a particle related to its mobility and diffusion coefficient(s)?Electrophoresis, 1995
- Anomalous diffusion due to obstacles: a Monte Carlo studyBiophysical Journal, 1994
- Lateral diffusion and aggregation. A Monte Carlo studyBiophysical Journal, 1992
- The sieving of spheres during agarose gel electrophoresis: Quantitation and modelingBiopolymers, 1989
- Off lattice simulations of cluster-cluster aggregation in dimensions 2–6Physics Letters A, 1985
- Diffusion-limited aggregation in three dimensions: Results from a new cluster-cluster aggregation modelJournal of Colloid and Interface Science, 1984
- Agarose gels: Properties and use for electrophoresisElectrophoresis, 1983
- Unified Theory for Gel Electrophoresis and Gel FiltrationProceedings of the National Academy of Sciences, 1970
- Starch-gel electrophoresis—Application to the classification of pituitary proteins and polypeptidesMetabolism, 1964
- The spaces in a uniform random suspension of fibresTransactions of the Faraday Society, 1958