Reordering contigs of draft genomes using the Mauve Aligner
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Open Access
- 10 June 2009
- journal article
- research article
- Published by Oxford University Press (OUP) in Bioinformatics
- Vol. 25 (16), 2071-2073
- https://doi.org/10.1093/bioinformatics/btp356
Abstract
Summary: Mauve Contig Mover provides a new method for proposing the relative order of contigs that make up a draft genome based on comparison to a complete or draft reference genome. A novel application of the Mauve aligner and viewer provides an automated reordering algorithm coupled with a powerful drill-down display allowing detailed exploration of results. Availability: The software is available for download at http://gel.ahabs.wisc.edu/mauve. Contact:rissman@wisc.edu Supplementary information: Supplementary data are available at Bioinformatics online and http://gel.ahabs.wisc.eduKeywords
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