PFAAT version 2.0: A tool for editing, annotating, and analyzing multiple sequence alignments
Open Access
- 11 October 2007
- journal article
- Published by Springer Nature in BMC Bioinformatics
- Vol. 8 (1), 381
- https://doi.org/10.1186/1471-2105-8-381
Abstract
By virtue of their shared ancestry, homologous sequences are similar in their structure and function. Consequently, multiple sequence alignments are routinely used to identify trends that relate to function. This type of analysis is particularly productive when it is combined with structural and phylogenetic analysis.Keywords
This publication has 21 references indexed in Scilit:
- Multiple sequence alignmentCurrent Opinion in Structural Biology, 2006
- The Jalview Java alignment editorBioinformatics, 2004
- ModView, visualization of multiple protein sequences and structuresBioinformatics, 2003
- CHROMA: consensus-based colouring of multiple alignments for publicationBioinformatics, 2001
- ANTHEPROT: An integrated protein sequence analysis software with client/server capabilitiesComputers in Biology and Medicine, 2001
- A comprehensive comparison of multiple sequence alignment programsNucleic Acids Research, 1999
- DINAMO: interactive protein alignment and model building.Bioinformatics, 1999
- CINEMA—a novel Colour INteractive Editor for Multiple AlignmentsGene, 1998
- SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogenyBioinformatics, 1996
- ALSCRIPT: a tool to format multiple sequence alignmentsProtein Engineering, Design and Selection, 1993