PHYLOGENETIC VERSUS FUNCTIONAL SIGNALS IN THE EVOLUTION OF FORM-FUNCTION RELATIONSHIPS IN TERRESTRIAL VISION
- 14 April 2011
- Vol. 65 (8), 2245-2257
- https://doi.org/10.1111/j.1558-5646.2011.01271.x
Abstract
Phylogeny is deeply pertinent to evolutionary studies. Traits that perform a body function are expected to be strongly influenced by physical "requirements" of the function. We investigated if such traits exhibit phylogenetic signals, and, if so, how phylogenetic noises bias quantification of form-function relationships. A form-function system that is strongly influenced by physics, namely the relationship between eye morphology and visual optics in amniotes, was used. We quantified the correlation between form (i.e., eye morphology) and function (i.e., ocular optics) while varying the level of phylogenetic bias removal through adjusting Pagel's λ. Ocular soft-tissue dimensions exhibited the highest correlation with ocular optics when 1% of phylogenetic bias expected from Brownian motion was removed (i.e., λ= 0.01); the value for hard-tissue data were 8%. A small degree of phylogenetic bias therefore exists in morphology despite of the stringent functional constraints. We also devised a phylogenetically informed discriminant analysis and recorded the effects of phylogenetic bias on this method using the same data. Use of proper λ values during phylogenetic bias removal improved misidentification rates in resulting classifications when prior probabilities were assumed to be equal. Even a small degree of phylogenetic bias affected the classification resulting from phylogenetically informed discriminant analysis.Keywords
This publication has 48 references indexed in Scilit:
- EVOLUTION OF SCAPULA SIZE AND SHAPE IN DIDELPHID MARSUPIALS (DIDELPHIMORPHIA: DIDELPHIDAE)Evolution, 2009
- Phylogeny of “core Gruiformes” (Aves: Grues) and resolution of the Limpkin–Sungrebe problemMolecular Phylogenetics and Evolution, 2007
- TESTING FOR PHYLOGENETIC SIGNAL IN COMPARATIVE DATA: BEHAVIORAL TRAITS ARE MORE LABILEEvolution, 2003
- Phylogeny of Tetraoninae and other galliform birds using mitochondrial 12S and ND2 genesMolecular Phylogenetics and Evolution, 2002
- Generalized Discriminant Analysis Using a Kernel ApproachNeural Computation, 2000
- Using the Past to Predict the Present: Confidence Intervals for Regression Equations in Phylogenetic Comparative MethodsThe American Naturalist, 2000
- An Introduction to Phylogenetically Based Statistical Methods, with a New Method for Confidence Intervals on Ancestral ValuesAmerican Zoologist, 1999
- Procedures for the Analysis of Comparative Data Using Phylogenetically Independent ContrastsSystematic Biology, 1992
- Phylogenies and the Comparative MethodThe American Naturalist, 1985
- THE STATISTICAL UTILIZATION OF MULTIPLE MEASUREMENTSAnnals of Eugenics, 1938