The Universal Protein Resource (UniProt)
Top Cited Papers
Open Access
- 16 November 2006
- journal article
- research article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 35 (Database), D193-D197
- https://doi.org/10.1093/nar/gkl929
Abstract
The ability to store and interconnect all available information on proteins is crucial to modern biological research. Accordingly, the Universal Protein Resource (UniProt) plays an increasingly important role by providing a stable, comprehensive, freely accessible central resource on protein sequences and functional annotation. UniProt is produced by the UniProt Consortium, formed in 2002 by the European Bioinformatics Institute (EBI), the Protein Information Resource (PIR) and the Swiss Institute of Bioinformatics (SIB). The core activities include manual curation of protein sequences assisted by computational analysis, sequence archiving, development of a user-friendly UniProt web site and the provision of additional value-added information through cross-references to other databases. UniProt is comprised of three major components, each optimized for different uses: the UniProt Archive, the UniProt Knowledgebase and the UniProt Reference Clusters. An additional component consisting of metagenomic and environmental sequences has recently been added to UniProt to ensure availability of such sequences in a timely fashion. UniProt is updated and distributed on a bi-weekly basis and can be accessed online for searches or download at Author Webpage.Keywords
This publication has 10 references indexed in Scilit:
- UniSave: the UniProtKB Sequence/Annotation Version databaseBioinformatics, 2006
- Filtering erroneous protein annotationBioinformatics, 2004
- Current views on scorpion toxins specific for K+-channelsToxicon, 2004
- UniProt archiveBioinformatics, 2004
- The iProClass integrated database for protein functional analysisComputational Biology and Chemistry, 2004
- PIRSF: family classification system at the Protein Information ResourceNucleic Acids Research, 2004
- Automated annotation of microbial proteomes in SWISS-PROTComputational Biology and Chemistry, 2003
- Clustering of highly homologous sequences to reduce the size of large protein databasesBioinformatics, 2001
- A unified nomenclature for short-chain peptides isolated from scorpion venoms: α-KTx molecular subfamiliesTrends in Pharmacological Sciences, 1999
- A novel method for automatic functional annotation of proteins.Bioinformatics, 1999