Structural fluctuations between two conformational states of a transmembrane helical peptide are related to its channel‐forming properties in planar lipid membranes

Abstract

Putative transmembrane helices of membrane proteins in general and channel proteins in particular often contain proline residues which may induce a bend into an otherwise regular helical structure. Here we show by fluorescence‐energy‐transfer measurements and molecular‐dynamics calculations that, in the case of synthetic bilayer‐spanning helical polypeptides, a proline‐induced bend in a helix acts as a flexible element mediating rigid body motions of the helical segments. Most important, such structural fluctuations in the transmembrane helices seem to play a functional role in the formation of ionic channels in planar lipid bilayers and biological membranes.